Object
Title: KIS: an automated attribute induction method for classification of DNA sequences
Contributor:
Korbicz, Józef - red. ; Uciński, Dariusz - red.
Group publication title:
Abstract:
This paper presents an application of methods from the machine learning domain to solving the task of DNA sequence recognition. We present an algorithm that learns to recognize groups of DNA sequences sharing common features such as sequence functionality. We demonstrate application of the algorithm to find splice sites, i.e., to properly detect donor and acceptor sequences ; We compare the results with those of reference methods that have been designed and tuned to detect splice sites. We also show how to use the algorithm to find a human readable model of the IRE (Iron-Responsive Element) and to find IRE sequences. The method, although universal, yields results which are of quality comparable to those obtained by reference methods. In contrast to reference methods, this approach uses models that operate on sequence patterns, which facilitates interpretation of the results by humans.
Publisher:
Zielona Góra: Uniwersytet Zielonogórski
Resource Identifier:
DOI:
Pages:
Source:
AMCS, Volume 22, Number 3 (2012) ; click here to follow the link
Language:
Rights:
Biblioteka Uniwersytetu Zielonogórskiego
Object collections:
- Digital Library of Zielona Góra > Repository > Faculties > Faculty of Computer, Electrical and Control Engineering
- Digital Library of Zielona Góra > Repository > Types of work > Articles
- Digital Library of Zielona Góra > Repository > Scientific journals and UZ publishing series > International Journal of Applied Mathematics and Computer Science (AMCS)
- Digital Library of Zielona Góra > Repository > Scientific journals and UZ publishing series > International Journal of Applied Mathematics and Computer Science (AMCS) > International Journal of Applied Mathematics and Computer Science (AMCS) (2012)
Last modified:
Sep 8, 2021
In our library since:
Sep 10, 2018
Number of object content hits:
103
All available object's versions:
https://zbc.uz.zgora.pl/publication/55131
Show description in RDF format:
Show description in OAI-PMH format:
-
International Journal of Applied Mathematics and Computer Science (AMCS)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 23 (2013)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22 (2012)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 1 (2012)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 2 (2012)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 3 (2012)
- International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 3 (2012) - spis treści
- An approach to the analysis of observability and controllability in nonlinear systems via linear methods
- On the controllability of fractional dynamical systems
- Equivalent descriptions of a discrete-time fractional-order linear system and its stability domains
- A multi-model approach to Saint-Venant equations: a stability study by LMIs
- H[the sign of infinity] control of discrete-time linear systems constrained in state by equality constraints
- Enclosures for the solution set of parametric interval linear systems
- Variable Structure Observer design for a class of uncertain systems with a time-varying delay
- Bayesian reliability models of weibull systems: state of the art
- Modelling and control of an omnidirectional mobile manipulator
- A novel Fuzzy C-Regression Model algorithm using a new error measure and particle swarm optimization
- Optimal estimator of hypothesis probability for data mining problems with small samples
- Graph-based generation of a meta-learning search space
- Neural network segmentation of images from stained cucurbits leaves with colour symptoms of biotic and abiotic stresses
- Neural network based identification of hysteresis in human meridian systems
- A survey of subpixel edge detection methods for images of heat-emitting metal specimens
- KIS: an automated attribute induction method for classification of DNA sequences
- Modeling nonlinear road traffic networks for junction control
- Heuristic algorithms for optimization of task allocation and result distribution in peer-to-peer computing systems
- Joint queue-perturbed and weakly coupled power control for Wireless Backbone Networks
- The Fan-Raspaud conjecture: a randomized algorithmic approach and application to the pair assignment problem in cubic networks
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 4 (2012)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 22, number 1 (2012)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 21 (2011)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 20 (2010)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 19 (2009)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 18 (2008)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 17 (2007)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 16 (2006)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 15 (2005)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 13 (2003)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 12 (2002)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 11 (2001)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 10 (2000)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 9 (1999)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 8 (1998)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 7 (1997)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 6 (1996)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 5 (1995)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 4 (1994)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 3 (1993)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 2 (1992)
-
International Journal of Applied Mathematics and Computer Science (AMCS),volume 1 (1991)
-
International Journal of Applied Mathematics and Computer Science (AMCS), volume 23 (2013)
| Edition name | Date |
|---|---|
| KIS: an automated attribute induction method for classification of DNA sequences | Sep 8, 2021 |
